Working Schedule

Thursday, Jan. 12

Note:  The workshop is being held at the National Institute for Mathematical and Biological Synthesis (NIMBioS) located on the fourth floor of 1534 White Avenue within easy walking distance from the hotel.

8:30 Light Breakfast
9 Welcome
SCALE-IT Overview
Workshop Overview
Harry Richards, SCALE-IT
Ethel Stanley, BioQUEST
9:30 Learning to Swim – Dealing with Data Literacy
Activities PPT`
Exploring Ecoregions
WildFinder on the Web
WildFinder Spreadsheet
Data Literacy Talk PPT
Sam Donovan, University of Pittsburgh
Kristin Jenkins, NESCent
10:45 Break
11 Visualizing Data: Gapminder Kristin Jenkins
Sam Donovan
12:30 Lunch & Guest Speaker Dr. Jerome Baudry of the Biochemistry, Cellular, and Molecular Biology Department and the Center for Molecular Biophysics at ORNL
1:30 Coffee, dessert, and discussion
2 Introduction to the Protein Data Base and Visualizing Proteins: PyMOL & ProteopediaSome PyMOL tutorials that might be handy:

My PPT presentation

Stephen Everse, University of Vermont
3:30 Break
3:45 Establish Working Groups/Group work time on projects
4:45 Posting about group work

Friday, Jan. 13

8:30 Breakfast
9:00 Modeling SNPs to Understand Bacterial EvolutionBacterial Evolution
EMBL EBI

Project I Worksheet
ng.997-S2.xlsx
modified ng.977-S2.xlsx
isolates file

Project II Worksheet
burkisolates
Modified burkisolates
ClustalW2

Project III Worksheet
burksim.xls

Numbers Count! Project

Claudia Neuhauser, University of Minnesota Rochester
Ethel Stanley
10:15 Break
10:30 Modeling SNPs to Understand Bacterial Evolution Part 2 Claudia Neuhauser
Ethel Stanley
12:30 Lunch & Guest Speaker Dr. Bob Hettich of the Genome Science and Technology Program and the Organic and Biological Mass Spectrometry Group at ORNL
1:30 Coffee, dessert, and discussion
2:00 Paper: Incorporating Quantitative Reasoning in Common Core Courses 

 

John R. Jungck, Beloit College
3:30 Break
3:45

Group Project Work Time

4:45 Posting about group work
6:00

Group Dinner at Sheraton Four Points Hotel

Saturday, Jan. 14

8:30 Breakfast
9 Wrapping up and posting group projects Stephen Everse
Kristin Jenkins
9:30 Project Presentations
11:30 Participant Survey and Posting
11:45 Next Steps Ethel Stanley