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Multiple Alignment

These two worksheets implement a dynamic programming algorithm for simultaneous alignment of multiple sequences. The user inputs three sequences and sets scoring parameters for matches, mismatches, and gaps; the worksheet then calculates the optimal 3D trace-back path and displays the optimal alignment. Separate worksheets are available for global and local alignment.

Source

Author(s):
Tony Weisstein, Truman State University
Tim White, Massey University, Palmerston North Campus
Peter Lockhart, Massey University, Palmerston North Campus

Published by: BioQUEST Curriculum Consortium

OS: all

User Manuals and Curricular Materials
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Citation
Weisstein Tony , White Tim , Lockhart Peter () Multiple Alignment. A module of the Biological ESTEEM Collection, published by the BioQUEST Curriculum Consortium. URL: http://bioquest.org/esteem/esteem_details.php?product_id=215