Orientation to the workshop structure and flow. Introduction to BioQUEST – John R. Jungck, PI, BEDROCK

Introduction to HIV problem space and Biology Workbench – Sam Donovan, Co-PI, BEDROCK

Noon –- 1:15 pm

Working Lunch (on-site)

1:00 –- 2:00 pm

Invited Talk (title TBA), Manda Clair Jost, UT-Austin, http://www.bio.utexas.edu/faculty/jost

2:00 ––- 2:30 pm

Break and discussion

2:30 ––- 3:00 pm

Introduction to One Cell, Three Genomes Problem Space, John R. Jungck

3:00 –- 4:00 pm

Group Work: One Cell, Three Genomes

4:00 –- 4:30 pm

Evolutionary basis for bioinformatics I: An introduction to tree-thinking

Possible lab time after dinner.

9:00 –- 10:00 am

Group research progress reports (brief and informal)

10:00 –- 11:00 am

Evolutionary basis for bioinformatics II: Trees as tools, trees as hypotheses, trees in space, time and genealogy

11:00 –- 11:30 am

Introduction to BIRDD problem space

11:30 –- 1:00 pm

Working lunch: BIRDD group work

1:00 –-- 2:00 pm

TBA, David Hillis or John Jungck

2:00 –- 2:30 pm

Break and discussion

2:30 –- 3:30 pm

A sampler of tools, datasets, problem spaces, and resources

3:30 –- 4:00 pm

Groups form and discuss project assignments

4:00 –- 5:00 pm

Group work

Dinner together?

8:00 –- 9:30 am

Finish up group projects

9:30 –- 10:00 am

Upload projects

10:00 –- 11:00 am

Presentations

11:00 –- Noon

Wrap up and future directions, evaluations, and certificates.